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Guify

Guify creates a Graphical User Interface for SSH.

Works on any machine able to execute Java code, but is able to target only Linux (or more in general POSIX-compliant) systems.

Features:

Navigation in the File System;
Common file operations (cut, copy, rename, delete, paste, create);
File and folder transfer (to/from);
Integrated file editor.

Alternatives

If you want to achieve similar results you can:

Use WinSCP (Windows only);
Use a file manager like Nautilus, Konqueror, PCManFM (Linux examples)
Configure an FTP server and accessing it through FileZilla;
Mount a remote partition locally with the SMB protocol;
Route X11 output to your local machine over SSH;
...

Screenshots

Homescreen